Ecosystemic support for evidence-based biological reasoning

Date

Thu Feb 9th 10:00am to 11:00am PST

Presenter

Tim Clark
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Abstract

In this talk we will discuss the BD2K Data Citation effort, initiated as a part of bioCADDIE. We will situate this effort in the context of formal argumentation theory as developed by modern AI researchers, and we will present current results of the Data Citation Pilot, including guidelines for publishers now implemented by Elsevier in 1,800 journals.

Bios

Tim Clark, Ph.D., is an Assistant Professor of Neurology at Harvard Medical School and Director of Informatics at the MassGeneral Institute for Neurodegenerative Disease. He co-directs the Data and Statistics Core at the Massachusetts Alzheimer Disease Research Center. Dr. Clark’s core research group is based in the Neurology Research Department of the Massachusetts General Hospital (MGH), where it works in the areas of neuroinformatics, data science, and scientific communication. Dr. Clark was formerly Vice President of Informatics at Millennium Pharmaceuticals, where his team built one of the first genomics-based drug discovery software platforms in the pharmaceutical industry. He began his career in life science informatics at the NCBI/NIH, where he led the database development team for NCBI GenBank. Dr. Clark holds a Ph.D. in Computer Science from the University of Manchester, where he worked on biomedical semantics and knowledge representation with Professor Carole Goble CBE FREng FBCS. He is an Editorial Board member of the journals Briefings in Bioinformatics, and Frontiers in Library and Information Science.

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