bioCADDIE All-Hands Meeting

This year's bioCADDIE All-Hands Meeting will be held on September 11, 2016, at the Sheraton Downtown Denver prior to the start of International Data Week. We will be meeting in Tower Courts C and D. Please find a map and directions here.

Time Title Presenter(s) Slides Video Recording
7:30 - 8:30 Check in and breakfast      
8:30 - 8:45 Welcome Lucila Ohno-Machado, UCSD  view here watch here
8:45 - 9:15 Introduction to the Commons Ron Margolis, BD2K, NIH view here watch here
9:15 - 9:45 Overview of bioCADDIE Lucila Ohno-Machado, UCSD view here watch here
9:45 - 10:15 DataMed: Intro, Demo, User Interface Hua Xu, UT Health view here watch here
10:15 - 10:30 Break      
10:30 - 11:30 Nuts and Bolts: Ingestion Pipeline, System Evaluation, Usability Testing, Challenge Jeff Grethe, UCSD; Trevor Cohen, UT Health; Todd Johnson, UT Health, Hua Xu, UT Health view here watch here Ingestion Pipeline
watch here System Evaluation
watch here Usability Testing
Supplement Projects:    
11:30 - 11:45 CountEverything Xiaoqian Jiang, UCSD view here watch here
11:45 - 12:00 Data Citation Implementation Pilot (DCIP) Tim Clark, Harvard view here watch here
12:00 - 1:00  Lunch and Open Discussion - "What does success look like for bioCADDIE?" Moderated Discussion led by Ron Margolis, BD2K, NIH    
Pilot Projects:    
1:00 - 1:15      Metadata Discover and Integration to Support Repurposing of Heterogeneous
Data Using the OpenFurther Platform
Ram Gouripeddi, University of Utah view here watch here
1:15 - 1:30       Feasibility Study of Indexing Clinical Research Data Using HL7 FHIR Harold Solbrig, Mayo Clinic view here watch here
1:30 - 1:45 Distributed Data Discovery Using GYM: GitHub, YAML, and Markdown Chris Mungall, Lawrence Berkeley National Laboratory view here watch here
1:45 - 2:45 bioCADDIE Next Steps and BD2K Vision for bioCADDIE Lucila Ohno-Machado, UCSD and Vivien Bonazzi, BD2K, NIH view here watch here
2:45 - 3:00 Break      
Synergistic Approaches to Data Indexing: (jointly sponsored by bioCADDIE and Heart BD2K)    
3:00 - 3:30 DATS: the DatAsets Tag Suite underpinning DataMed Susanna-Asunta Sansone, Oxford view here watch here
3:30 - 4:00 Omics Discovery Index (OmicsDI) Henning Hermjakob, EMBL - EBI view here watch here
4:00 - 4:30 LINCS: FAIR Dataset Landing Pages for LINCS and BD2K Stephan Schürer, University of Miami view here watch here
4:30 - 5:00 Center for Expanded Data Annotation and Retrievial (CEDAR)  Mark Musen, Stanford view here watch here
5:00 - 5:30 AZTEC Index Wei Wang and Brian Bleakley, BD2K Centers Coordinating Center view here watch here
5:30 - 6:00  All Hands Discussion      
6:00 - 6:30 Hor d'ourves and Socializing (In Tower Court D)      
6:00 - 6:30 Closed Meeting - Steering Committee, Executive Committee, Advisory Board (in Tower Court C)      
6:30 Dinner (In Tower Court D)